Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EHT25_26590 | Not Available | Negative | 6699734 - 6702562 | 105620.0 |
| polysaccharide deacetylase family protein | EHT25_26595 | Not Available | Negative | 6702811 - 6703638 | 32071.4 |
| hypothetical protein | EHT25_26600 | Not Available | Positive | 6703710 - 6704006 | 11271.5 |
| glycoside hydrolase | EHT25_26605 | Not Available | Negative | 6704018 - 6705979 | 73723.9 |
| hypothetical protein | EHT25_26610 | Not Available | Negative | 6706116 - 6706316 | 8105.85 |
| alpha-2-macroglobulin family protein | EHT25_26615 | Not Available | Negative | 6706529 - 6711988 | 199851.0 |
| acyl-coa dehydrogenase | EHT25_26620 | Not Available | Negative | 6712392 - 6714191 | 65932.7 |
| lysm peptidoglycan-binding domain-containing protein | EHT25_26625 | Not Available | Positive | 6714448 - 6716562 | 78668.2 |
| acetyl-coa c-acyltransferase | EHT25_26630 | Not Available | Negative | 6716612 - 6717787 | 41386.8 |
| four helix bundle protein | EHT25_26635 | Not Available | Negative | 6717839 - 6718210 | 14081.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
