Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase | EHT25_26540 | Not Available | Positive | 6690025 - 6690744 | 26469.7 |
| imidazole glycerol phosphate synthase subunit hisf | EHT25_26545 | Not Available | Positive | 6690852 - 6691613 | 26966.4 |
| bifunctional phosphoribosyl-amp cyclohydrolase/phosphoribosyl-atp diphosphatase hisie | EHT25_26550 | Not Available | Positive | 6691616 - 6692221 | 22650.8 |
| phage holin family protein | EHT25_26555 | Not Available | Positive | 6692319 - 6692654 | 11824.4 |
| hypothetical protein | EHT25_26560 | Not Available | Positive | 6692864 - 6693643 | 29022.7 |
| tigr00730 family rossman fold protein | EHT25_26565 | Not Available | Positive | 6693695 - 6694249 | 20658.2 |
| ompa family protein | EHT25_26570 | Not Available | Positive | 6694667 - 6696244 | 57787.8 |
| dinb family protein | EHT25_26575 | Not Available | Negative | 6696362 - 6696979 | 24071.6 |
| gmc family oxidoreductase | EHT25_26580 | Not Available | Positive | 6697177 - 6698889 | 63905.7 |
| glpgli family protein | EHT25_26585 | Not Available | Negative | 6698965 - 6699711 | 28890.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
