Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar phosphate isomerase/epimerase | EHT25_26490 | Not Available | Positive | 6675326 - 6676204 | 32480.2 |
| dehydrogenase | EHT25_26495 | Not Available | Positive | 6676316 - 6679249 | 107507.0 |
| peptidoglycan synthetase | EHT25_26500 | Not Available | Negative | 6679345 - 6680700 | 50584.4 |
| arginine decarboxylase | EHT25_26505 | Not Available | Positive | 6681031 - 6682521 | 57392.0 |
| had family hydrolase | EHT25_26510 | Not Available | Negative | 6682723 - 6683244 | 19561.6 |
| hypothetical protein | EHT25_26515 | Not Available | Positive | 6683424 - 6684557 | 42825.5 |
| valine--trna ligase | EHT25_26520 | Not Available | Negative | 6684636 - 6687311 | 102543.0 |
| duf72 domain-containing protein | EHT25_26525 | Not Available | Positive | 6687502 - 6688428 | 35147.7 |
| hypothetical protein | EHT25_26530 | Not Available | Positive | 6688679 - 6689251 | 22502.9 |
| imidazole glycerol phosphate synthase subunit hish | EHT25_26535 | Not Available | Positive | 6689369 - 6689956 | 21591.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
