Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| transcription elongation factor grea | EHT25_25760 | Not Available | Negative | 6497396 - 6497869 | 17097.5 |
| methionyl-trna formyltransferase | EHT25_25765 | Not Available | Positive | 6498196 - 6499092 | 33065.8 |
| dihydrofolate reductase | EHT25_25770 | Not Available | Positive | 6499096 - 6499590 | 18380.8 |
| uma2 family endonuclease | EHT25_25775 | Not Available | Negative | 6499594 - 6500205 | 23150.3 |
| hypothetical protein | EHT25_25780 | Not Available | Negative | 6500241 - 6502316 | 78201.6 |
| metallophosphoesterase | EHT25_25785 | Not Available | Negative | 6502435 - 6503148 | 27283.3 |
| translation initiation factor if-2 | EHT25_25790 | Not Available | Negative | 6503228 - 6506611 | 123791.0 |
| transcription termination/antitermination protein nusa | EHT25_25795 | Not Available | Negative | 6506716 - 6507960 | 47490.6 |
| ribosome maturation factor rimp | EHT25_25800 | Not Available | Negative | 6508066 - 6508545 | 17911.6 |
| endonuclease | EHT25_25805 | Not Available | Positive | 6508789 - 6509958 | 45511.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
