Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phytanoyl-coa dioxygenase | EHT25_25310 | Not Available | Negative | 6341456 - 6342436 | 37755.6 |
| arac family transcriptional regulator | EHT25_25315 | Not Available | Positive | 6342591 - 6343433 | 33181.9 |
| ftsx-like permease family protein | EHT25_25320 | Not Available | Positive | 6343625 - 6346024 | 89471.0 |
| abc transporter permease | EHT25_25325 | Not Available | Positive | 6346145 - 6348499 | 86739.1 |
| hypothetical protein | EHT25_25330 | Not Available | Positive | 6348612 - 6349217 | 21996.9 |
| uma2 family endonuclease | EHT25_25335 | Not Available | Negative | 6349271 - 6349756 | 18359.0 |
| hydroxyethylthiazole kinase | EHT25_25340 | Not Available | Positive | 6349990 - 6350844 | 29573.7 |
| thiamine phosphate synthase | EHT25_25345 | Not Available | Positive | 6350962 - 6351591 | 22758.3 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | EHT25_25350 | Not Available | Positive | 6351588 - 6352409 | 28981.9 |
| thiaminase ii | EHT25_25355 | Not Available | Positive | 6352406 - 6353056 | 24716.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
