Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydroxymethylglutaryl-coa lyase | EHT25_24960 | Not Available | Negative | 6246952 - 6247794 | 30346.3 |
| endonuclease muts2 | EHT25_24965 | Not Available | Positive | 6248072 - 6250495 | 91078.5 |
| uma2 family endonuclease | EHT25_24970 | Not Available | Negative | 6250585 - 6251145 | 21567.5 |
| permease | EHT25_24975 | Not Available | Positive | 6251243 - 6252151 | 33914.4 |
| hypothetical protein | EHT25_24980 | Not Available | Positive | 6252240 - 6254774 | 93331.8 |
| hypothetical protein | EHT25_24985 | Not Available | Negative | 6254849 - 6255577 | 26927.1 |
| lyttr family transcriptional regulator | EHT25_24990 | Not Available | Negative | 6255687 - 6256562 | 33220.7 |
| sulfite oxidase-like oxidoreductase | EHT25_24995 | Not Available | Positive | 6256638 - 6257348 | 26995.5 |
| sis domain-containing protein | EHT25_25000 | Not Available | Negative | 6257470 - 6258030 | 20662.4 |
| rok family protein | EHT25_25005 | Not Available | Negative | 6258087 - 6258980 | 31671.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
