Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetr/acrr family transcriptional regulator | EHT25_24810 | Not Available | Negative | 6210284 - 6210838 | 20944.3 |
| uroporphyrinogen decarboxylase | EHT25_24815 | Not Available | Positive | 6211034 - 6212068 | 38135.2 |
| hypothetical protein | EHT25_24820 | Not Available | Positive | 6212065 - 6212298 | 9185.65 |
| n-acetyltransferase | EHT25_24825 | Not Available | Negative | 6212311 - 6212751 | 16940.1 |
| d-glycero-beta-d-manno-heptose-7-phosphate kinase | EHT25_24830 | Not Available | Negative | 6212755 - 6213750 | 36233.9 |
| hypothetical protein | EHT25_24835 | Not Available | Negative | 6213877 - 6214533 | 24729.3 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | EHT25_24840 | Not Available | Negative | 6214763 - 6216049 | 46712.9 |
| t9ss c-terminal target domain-containing protein | EHT25_24845 | Not Available | Positive | 6216147 - 6218411 | 82680.2 |
| d-2-hydroxyacid dehydrogenase | EHT25_24850 | Not Available | Positive | 6218460 - 6219389 | 33870.6 |
| glycosyl hydrolase family 43 | EHT25_24855 | Not Available | Positive | 6219465 - 6220490 | 38197.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
