Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gfo/idh/moca family oxidoreductase | EHT25_24760 | Not Available | Positive | 6202703 - 6203680 | 35987.0 |
| galactose oxidase | EHT25_24765 | Not Available | Positive | 6203723 - 6204691 | 35649.6 |
| phosphoribosylformylglycinamidine cyclo-ligase | EHT25_24770 | Not Available | Positive | 6204695 - 6205867 | 42416.6 |
| tautomerase family protein | EHT25_24775 | Not Available | Positive | 6205920 - 6206309 | 14888.2 |
| duf167 domain-containing protein | EHT25_24780 | Not Available | Positive | 6206408 - 6206677 | 9790.84 |
| sigma-70 family rna polymerase sigma factor | EHT25_24785 | Not Available | Positive | 6206690 - 6207268 | 22308.8 |
| hypothetical protein | EHT25_24790 | Not Available | Positive | 6207265 - 6207462 | 7327.88 |
| prolipoprotein diacylglyceryl transferase | EHT25_24795 | Not Available | Positive | 6207484 - 6208332 | 32206.2 |
| hypothetical protein | EHT25_24800 | Not Available | Negative | 6208343 - 6208900 | 21482.9 |
| beta-ketoacyl-[acyl-carrier-protein] synthase ii | EHT25_24805 | Not Available | Negative | 6208959 - 6210200 | 43984.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
