Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| damage-inducible protein dinb | EHT25_24360 | Not Available | Positive | 6092767 - 6093219 | 17226.6 |
| ghkl domain-containing protein | EHT25_24365 | Not Available | Negative | 6093228 - 6094556 | 49621.7 |
| hypothetical protein | EHT25_24370 | Not Available | Positive | 6094613 - 6094837 | 8413.22 |
| sigma-54-dependent fis family transcriptional regulator | EHT25_24375 | Not Available | Negative | 6095160 - 6096557 | 52258.7 |
| efflux rnd transporter periplasmic adaptor subunit | EHT25_24380 | Not Available | Positive | 6096890 - 6098137 | 46784.9 |
| abc transporter atp-binding protein | EHT25_24385 | Not Available | Positive | 6098219 - 6098896 | 25185.3 |
| hypothetical protein | EHT25_24390 | Not Available | Positive | 6099005 - 6099199 | 7054.94 |
| ftsx-like permease family protein | EHT25_24395 | Not Available | Positive | 6099308 - 6101728 | 90107.4 |
| ftsx-like permease family protein | EHT25_24400 | Not Available | Positive | 6101840 - 6104257 | 89885.9 |
| uma2 family endonuclease | EHT25_24405 | Not Available | Negative | 6104276 - 6104743 | 17768.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
