Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EHT25_02375 | Not Available | Positive | 548003 - 548842 | 30449.3 |
| arac family transcriptional regulator | EHT25_02380 | Not Available | Positive | 548913 - 549722 | 31527.8 |
| alpha/beta hydrolase | EHT25_02385 | Not Available | Positive | 549722 - 550618 | 33256.4 |
| pyridoxamine 5'-phosphate oxidase family protein | EHT25_02390 | Not Available | Negative | 550929 - 551552 | 23057.4 |
| plp-dependent aminotransferase family protein | EHT25_02395 | Not Available | Positive | 551769 - 553238 | 54584.9 |
| cupin domain-containing protein | EHT25_02400 | Not Available | Negative | 553249 - 554013 | 28260.9 |
| hypothetical protein | EHT25_02405 | Not Available | Negative | 554101 - 554589 | 18687.9 |
| hypothetical protein | EHT25_02410 | Not Available | Negative | 554857 - 556206 | 49773.1 |
| sdr family oxidoreductase | EHT25_02415 | Not Available | Positive | 556841 - 557557 | 25414.3 |
| hypothetical protein | EHT25_02420 | Not Available | Negative | 557642 - 558037 | 14310.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
