Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dihydrodipicolinate synthase family protein | EHT25_24105 | Not Available | Negative | 6027574 - 6028485 | 32873.9 |
| arac family transcriptional regulator | EHT25_24110 | Not Available | Positive | 6028699 - 6029562 | 33538.2 |
| s9 family peptidase | EHT25_24115 | Not Available | Positive | 6029567 - 6031753 | 82137.1 |
| m1 family peptidase | EHT25_24120 | Not Available | Positive | 6031793 - 6033439 | 62931.2 |
| hypothetical protein | EHT25_24125 | Not Available | Negative | 6033776 - 6034150 | 13899.8 |
| hypothetical protein | EHT25_24135 | Not Available | Negative | 6034882 - 6035376 | 18527.5 |
| sigma-70 family rna polymerase sigma factor | EHT25_24140 | Not Available | Negative | 6035384 - 6035971 | 22542.8 |
| caspase family protein | EHT25_24145 | Not Available | Negative | 6036019 - 6036771 | 27609.7 |
| hypothetical protein | EHT25_24150 | Not Available | Negative | 6036768 - 6038381 | 59218.9 |
| fha domain-containing protein | EHT25_24155 | Not Available | Negative | 6038402 - 6038851 | 16912.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
