Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4242 domain-containing protein | EHT25_23955 | Not Available | Positive | 5990644 - 5991261 | 22326.7 |
| gluconate 2-dehydrogenase subunit 3 family protein | EHT25_23960 | Not Available | Positive | 5991654 - 5992181 | 18704.4 |
| gmc family oxidoreductase | EHT25_23965 | Not Available | Positive | 5992196 - 5993908 | 63939.1 |
| glycosyltransferase | EHT25_23970 | Not Available | Negative | 5994012 - 5995208 | 44664.1 |
| glycosyltransferase family 2 protein | EHT25_23975 | Not Available | Negative | 5995266 - 5996492 | 45651.8 |
| response regulator | EHT25_23980 | Not Available | Negative | 5996772 - 5997179 | 15519.1 |
| o-antigen ligase domain-containing protein | EHT25_23985 | Not Available | Positive | 5997698 - 5999164 | 55088.7 |
| gluconate 2-dehydrogenase subunit 3 family protein | EHT25_23990 | Not Available | Positive | 5999300 - 5999872 | 20988.4 |
| gmc family oxidoreductase | EHT25_23995 | Not Available | Positive | 5999886 - 6001601 | 64070.7 |
| acyltransferase | EHT25_24000 | Not Available | Negative | 6001609 - 6002250 | 23109.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
