Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4199 domain-containing protein | EHT25_23800 | Not Available | Negative | 5949519 - 5950112 | 22356.0 |
| dihydroorotase | EHT25_23805 | Not Available | Negative | 5950119 - 5951414 | 47417.8 |
| glycine cleavage system protein gcvh | EHT25_23810 | Not Available | Negative | 5951467 - 5951847 | 13729.1 |
| pyrroloquinoline quinone-dependent dehydrogenase | EHT25_23815 | Not Available | Negative | 5951925 - 5954054 | 77603.8 |
| duf4339 domain-containing protein | EHT25_23820 | Not Available | Positive | 5954314 - 5954847 | 19500.2 |
| duf2752 domain-containing protein | EHT25_23825 | Not Available | Positive | 5954858 - 5955214 | 13336.5 |
| hypothetical protein | EHT25_23830 | Not Available | Negative | 5955215 - 5956351 | 42226.2 |
| cell surface protein spra | EHT25_23835 | Not Available | Negative | 5956435 - 5963826 | 278568.0 |
| holliday junction branch migration protein ruva | EHT25_23840 | Not Available | Negative | 5964107 - 5964700 | 21546.6 |
| lysm peptidoglycan-binding domain-containing protein | EHT25_23845 | Not Available | Negative | 5964915 - 5966495 | 60107.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
