Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase family protein | EHT25_23250 | Not Available | Positive | 5828166 - 5829158 | 37406.2 |
| dinb family protein | EHT25_23255 | Not Available | Positive | 5830092 - 5830724 | 24555.4 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_23260 | Not Available | Positive | 5831147 - 5831299 | 5995.15 |
| gfo/idh/moca family oxidoreductase | EHT25_23265 | Not Available | Positive | 5831455 - 5832825 | 50783.4 |
| duf1080 domain-containing protein | EHT25_23270 | Not Available | Positive | 5832869 - 5833591 | 26886.9 |
| cytochrome ubiquinol oxidase subunit i | EHT25_23275 | Not Available | Positive | 5833931 - 5835301 | 51000.8 |
| cytochrome d ubiquinol oxidase subunit ii | EHT25_23280 | Not Available | Positive | 5835356 - 5836390 | 38971.8 |
| peptidase s41 | EHT25_23285 | Not Available | Negative | 5836509 - 5837930 | 53968.0 |
| dna-binding response regulator | EHT25_23290 | Not Available | Negative | 5838035 - 5838847 | 30925.6 |
| histidine kinase | EHT25_23295 | Not Available | Negative | 5838828 - 5839874 | 40656.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
