Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | EHT25_23200 | Not Available | Positive | 5811993 - 5815025 | 113635.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_23205 | Not Available | Positive | 5815114 - 5816946 | 69021.7 |
| gfo/idh/moca family oxidoreductase | EHT25_23210 | Not Available | Positive | 5817098 - 5818447 | 49923.2 |
| glucose/galactose mfs transporter | EHT25_23215 | Not Available | Positive | 5818523 - 5819854 | 48651.9 |
| glucosamine-6-phosphate deaminase | EHT25_23220 | Not Available | Positive | 5819876 - 5820664 | 29390.3 |
| gfo/idh/moca family oxidoreductase | EHT25_23225 | Not Available | Positive | 5820694 - 5821704 | 37054.1 |
| n-acetylglucosamine-6-phosphate deacetylase | EHT25_23230 | Not Available | Positive | 5821701 - 5822891 | 42464.3 |
| hypothetical protein | EHT25_23235 | Not Available | Positive | 5822941 - 5826117 | 115281.0 |
| duf1080 domain-containing protein | EHT25_23240 | Not Available | Positive | 5826145 - 5826942 | 29450.9 |
| gfo/idh/moca family oxidoreductase | EHT25_23245 | Not Available | Positive | 5827058 - 5828140 | 39734.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
