Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susc/raga family tonb-linked outer membrane protein | EHT25_23050 | Not Available | Negative | 5773373 - 5776642 | 118659.0 |
| fecr family protein | EHT25_23055 | Not Available | Negative | 5776859 - 5777977 | 42328.5 |
| sigma-70 family rna polymerase sigma factor | EHT25_23060 | Not Available | Negative | 5778053 - 5778679 | 24800.4 |
| sdr family oxidoreductase | EHT25_23065 | Not Available | Positive | 5779080 - 5779847 | 27614.2 |
| hypothetical protein | EHT25_23070 | Not Available | Negative | 5779966 - 5780958 | 36523.0 |
| flavin monoamine oxidase family protein | EHT25_23075 | Not Available | Negative | 5781072 - 5782634 | 58149.4 |
| histidinol-phosphate aminotransferase family protein | EHT25_23080 | Not Available | Negative | 5782703 - 5783881 | 43823.9 |
| abc transporter atp-binding protein | EHT25_23085 | Not Available | Positive | 5784284 - 5785186 | 32687.7 |
| peptidase m1 | EHT25_23090 | Not Available | Positive | 5785251 - 5788880 | 139182.0 |
| hypothetical protein | EHT25_23095 | Not Available | Negative | 5789005 - 5789478 | 17347.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
