Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | EHT25_22950 | Not Available | Negative | 5742300 - 5743091 | 27644.6 |
| gntr family transcriptional regulator | EHT25_22955 | Not Available | Positive | 5743222 - 5743953 | 27997.8 |
| pas domain s-box protein | EHT25_22960 | Not Available | Negative | 5743956 - 5745611 | 62520.0 |
| gfo/idh/moca family oxidoreductase | EHT25_22965 | Not Available | Negative | 5745639 - 5746832 | 44461.7 |
| hypothetical protein | EHT25_22970 | Not Available | Positive | 5747028 - 5747393 | 14019.3 |
| tonb-dependent receptor | EHT25_22975 | Not Available | Positive | 5747533 - 5749815 | 85092.5 |
| glycoside hydrolase | EHT25_22980 | Not Available | Positive | 5750069 - 5750380 | 11093.0 |
| port family protein | EHT25_22985 | Not Available | Positive | 5750693 - 5751985 | 48982.4 |
| xylose isomerase | EHT25_22990 | Not Available | Negative | 5752086 - 5753021 | 34552.5 |
| dehydrogenase | EHT25_22995 | Not Available | Negative | 5753039 - 5756149 | 113952.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
