Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT25_22850 | Not Available | Positive | 5720798 - 5721724 | 33887.0 |
| general stress protein | EHT25_22855 | Not Available | Positive | 5721927 - 5722463 | 19817.3 |
| duf1080 domain-containing protein | EHT25_22860 | Not Available | Negative | 5722516 - 5725905 | 121516.0 |
| gfo/idh/moca family oxidoreductase | EHT25_22865 | Not Available | Negative | 5725943 - 5727214 | 47473.3 |
| gfo/idh/moca family oxidoreductase | EHT25_22870 | Not Available | Positive | 5727466 - 5728869 | 52115.9 |
| duf1080 domain-containing protein | EHT25_22875 | Not Available | Positive | 5729017 - 5729715 | 26085.9 |
| duf3500 domain-containing protein | EHT25_22880 | Not Available | Positive | 5730007 - 5730960 | 36249.3 |
| type ii toxin-antitoxin system hica family toxin | EHT25_22885 | Not Available | Negative | 5730971 - 5731213 | 9124.2 |
| 2-oxoisovalerate dehydrogenase | EHT25_22890 | Not Available | Negative | 5731282 - 5731494 | 8056.51 |
| fad-binding protein | EHT25_22895 | Not Available | Negative | 5731567 - 5732958 | 49489.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
