Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| putative toxin-antitoxin system toxin component, pin family | EHT25_22800 | Not Available | Negative | 5708232 - 5708639 | 15437.7 |
| hypothetical protein | EHT25_22805 | Not Available | Negative | 5708639 - 5708905 | 10234.3 |
| rna polymerase sigma-70 factor | EHT25_22810 | Not Available | Negative | 5708937 - 5709539 | 23773.4 |
| fecr family protein | EHT25_22815 | Not Available | Positive | 5709767 - 5710834 | 40421.2 |
| susc/raga family tonb-linked outer membrane protein | EHT25_22820 | Not Available | Positive | 5711056 - 5714457 | 125589.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_22825 | Not Available | Positive | 5714469 - 5716154 | 63122.3 |
| hypothetical protein | EHT25_22830 | Not Available | Positive | 5716275 - 5718749 | 90761.5 |
| hypothetical protein | EHT25_22835 | Not Available | Positive | 5719058 - 5719627 | 22935.7 |
| hypothetical protein | EHT25_22840 | Not Available | Positive | 5719737 - 5720210 | 17579.4 |
| response regulator | EHT25_22845 | Not Available | Positive | 5720262 - 5720684 | 15768.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
