Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ragb/susd family nutrient uptake outer membrane protein | EHT25_22650 | Not Available | Negative | 5671655 - 5673211 | 57103.4 |
| tonb-dependent receptor | EHT25_22655 | Not Available | Negative | 5673331 - 5676507 | 116023.0 |
| hypothetical protein | EHT25_22660 | Not Available | Negative | 5677349 - 5677672 | 12432.7 |
| hypothetical protein | EHT25_22665 | Not Available | Negative | 5677647 - 5677826 | 6992.36 |
| hypothetical protein | EHT25_22670 | Not Available | Negative | 5677745 - 5678410 | 24690.6 |
| glycosidase | EHT25_22675 | Not Available | Negative | 5678590 - 5680077 | 57068.0 |
| glycosyltransferase | EHT25_22680 | Not Available | Negative | 5680176 - 5682476 | 85929.9 |
| patched family protein | EHT25_22685 | Not Available | Positive | 5682904 - 5685261 | 87894.8 |
| duf4286 family protein | EHT25_22690 | Not Available | Negative | 5685292 - 5685594 | 11993.5 |
| cytochrome b | EHT25_22695 | Not Available | Positive | 5685764 - 5686225 | 17426.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
