Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histone h1 | EHT25_22550 | Not Available | Negative | 5654767 - 5654946 | 6764.0 |
| pyridoxal phosphate-dependent aminotransferase family protein | EHT25_22555 | Not Available | Negative | 5655101 - 5656411 | 48182.0 |
| acetyl-coa carboxylase biotin carboxylase subunit | EHT25_22560 | Not Available | Positive | 5656636 - 5658135 | 55112.8 |
| hypothetical protein | EHT25_22565 | Not Available | Positive | 5658166 - 5658735 | 21233.1 |
| duf1080 domain-containing protein | EHT25_22570 | Not Available | Positive | 5658848 - 5659519 | 24991.8 |
| hypothetical protein | EHT25_22575 | Not Available | Positive | 5659679 - 5660047 | 13765.0 |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | EHT25_22580 | Not Available | Positive | 5660239 - 5661282 | 39414.4 |
| 2-c-methyl-d-erythritol 4-phosphate cytidylyltransferase | EHT25_22585 | Not Available | Positive | 5661364 - 5662041 | 24901.2 |
| methylmalonyl co-a mutase-associated gtpase meab | EHT25_22590 | Not Available | Positive | 5662123 - 5663097 | 35528.9 |
| sdr family nad(p)-dependent oxidoreductase | EHT25_22595 | Not Available | Negative | 5663098 - 5664066 | 36093.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
