Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ring-cleaving dioxygenase | EHT25_22245 | Not Available | Positive | 5570584 - 5571522 | 35129.4 |
| adp-ribosylglycohydrolase family protein | EHT25_22250 | Not Available | Negative | 5571576 - 5573126 | 57518.5 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_22255 | Not Available | Negative | 5573146 - 5574726 | 59062.2 |
| tonb-dependent receptor | EHT25_22260 | Not Available | Negative | 5574751 - 5577837 | 113322.0 |
| multidrug dmt transporter permease | EHT25_22265 | Not Available | Negative | 5577941 - 5578936 | 35371.1 |
| ribokinase | EHT25_22270 | Not Available | Negative | 5578964 - 5579914 | 33223.3 |
| hypothetical protein | EHT25_22275 | Not Available | Positive | 5580077 - 5581534 | 57674.0 |
| esterase | EHT25_22280 | Not Available | Negative | 5581585 - 5582313 | 28726.3 |
| gdsl family lipase | EHT25_22285 | Not Available | Negative | 5582387 - 5582980 | 22530.1 |
| hamp domain-containing protein | EHT25_22290 | Not Available | Negative | 5583077 - 5584858 | 66543.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
