Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tolc family protein | EHT25_02170 | Not Available | Positive | 494664 - 495998 | 48581.9 |
| hlyd family secretion protein | EHT25_02175 | Not Available | Positive | 496019 - 497131 | 39557.0 |
| dha2 family efflux mfs transporter permease subunit | EHT25_02180 | Not Available | Positive | 497147 - 498706 | 56082.0 |
| tetratricopeptide repeat protein | EHT25_02185 | Not Available | Positive | 498835 - 500259 | 52982.4 |
| gfo/idh/moca family oxidoreductase | EHT25_02190 | Not Available | Positive | 500366 - 501826 | 54166.1 |
| na+/h+ antiporter | EHT25_02195 | Not Available | Positive | 501998 - 503284 | 46994.9 |
| duf2264 domain-containing protein | EHT25_02200 | Not Available | Negative | 503296 - 504525 | 45699.6 |
| phospholipase c, phosphocholine-specific | EHT25_02205 | Not Available | Negative | 504890 - 507457 | 96474.5 |
| hypothetical protein | EHT25_02210 | Not Available | Positive | 507875 - 509167 | 45301.5 |
| helix-turn-helix domain-containing protein | EHT25_02215 | Not Available | Positive | 509304 - 510236 | 35794.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
