Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT25_22090 | Not Available | Positive | 5524445 - 5525116 | 25456.8 |
| class i sam-dependent methyltransferase | EHT25_22095 | Not Available | Positive | 5525230 - 5526036 | 30948.9 |
| asparagine synthase (glutamine-hydrolyzing) | EHT25_22100 | Not Available | Positive | 5526151 - 5528064 | 72344.9 |
| dehydrogenase | EHT25_22105 | Not Available | Positive | 5528061 - 5530238 | 79123.6 |
| heparinase | EHT25_22110 | Not Available | Positive | 5530235 - 5531794 | 59658.2 |
| glycosyltransferase wbub | EHT25_22115 | Not Available | Positive | 5531791 - 5533038 | 46586.2 |
| nad-dependent epimerase/dehydratase family protein | EHT25_22120 | Not Available | Positive | 5532971 - 5533972 | 35763.8 |
| glycosyltransferase | EHT25_22125 | Not Available | Positive | 5533969 - 5535123 | 44889.5 |
| glycosyltransferase family 4 protein | EHT25_22130 | Not Available | Positive | 5535101 - 5536123 | 38383.7 |
| hypothetical protein | EHT25_22135 | Not Available | Negative | 5536081 - 5537685 | 59349.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
