Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss c-terminal target domain-containing protein | EHT25_21990 | Not Available | Negative | 5489255 - 5492680 | 119514.0 |
| hypothetical protein | EHT25_21995 | Not Available | Positive | 5493566 - 5497894 | 150929.0 |
| sugar phosphate isomerase/epimerase | EHT25_22000 | Not Available | Negative | 5498195 - 5499109 | 33806.1 |
| hypothetical protein | EHT25_22005 | Not Available | Positive | 5499337 - 5499645 | 11327.7 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | EHT25_22010 | Not Available | Negative | 5500056 - 5501654 | 59918.7 |
| susc/raga family tonb-linked outer membrane protein | EHT25_22015 | Not Available | Negative | 5501654 - 5504842 | 115667.0 |
| dihydrodipicolinate synthase family protein | EHT25_22020 | Not Available | Positive | 5505175 - 5506257 | 39826.9 |
| hypothetical protein | EHT25_22025 | Not Available | Negative | 5506339 - 5506626 | 11004.1 |
| rna polymerase sigma-70 factor | EHT25_22030 | Not Available | Negative | 5506623 - 5507210 | 22453.0 |
| hypothetical protein | EHT25_22035 | Not Available | Positive | 5507555 - 5507821 | 10196.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
