Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EHT25_21835 | Not Available | Negative | 5442606 - 5444819 | 82043.9 |
| phosphatase pap2 family protein | EHT25_21840 | Not Available | Negative | 5444832 - 5446379 | 55985.3 |
| hypothetical protein | EHT25_21845 | Not Available | Negative | 5446442 - 5447344 | 33479.2 |
| hypothetical protein | EHT25_21850 | Not Available | Negative | 5447702 - 5448253 | 21383.8 |
| duf3616 domain-containing protein | EHT25_21855 | Not Available | Negative | 5448437 - 5449594 | 42590.0 |
| duf2490 domain-containing protein | EHT25_21860 | Not Available | Negative | 5449768 - 5450538 | 29370.2 |
| plp-dependent aminotransferase family protein | EHT25_21870 | Not Available | Negative | 5451545 - 5453020 | 55239.6 |
| carboxymuconolactone decarboxylase family protein | EHT25_21875 | Not Available | Positive | 5453114 - 5453554 | 16477.6 |
| lytic transglycosylase domain-containing protein | EHT25_21880 | Not Available | Negative | 5453558 - 5454742 | 43376.1 |
| lytic transglycosylase domain-containing protein | EHT25_21885 | Not Available | Negative | 5455006 - 5456088 | 40737.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
