Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| circadian clock protein kaib | EHT25_21785 | Not Available | Negative | 5429377 - 5429676 | 11253.9 |
| circadian clock protein kaic | EHT25_21790 | Not Available | Negative | 5429807 - 5431519 | 63578.7 |
| duf3179 domain-containing protein | EHT25_21795 | Not Available | Negative | 5431813 - 5433000 | 45330.2 |
| carboxymuconolactone decarboxylase family protein | EHT25_21800 | Not Available | Negative | 5433157 - 5433714 | 20370.1 |
| carboxymuconolactone decarboxylase | EHT25_21805 | Not Available | Negative | 5433862 - 5434410 | 19804.5 |
| mfs transporter | EHT25_21810 | Not Available | Negative | 5434458 - 5435693 | 44169.1 |
| tonb-dependent receptor | EHT25_21815 | Not Available | Negative | 5435695 - 5438493 | 101885.0 |
| crtac1 family protein | EHT25_21820 | Not Available | Negative | 5438501 - 5440759 | 83142.3 |
| carboxymuconolactone decarboxylase | EHT25_21825 | Not Available | Negative | 5440898 - 5441458 | 20567.7 |
| 5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase | EHT25_21830 | Not Available | Negative | 5441508 - 5442560 | 38548.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
