Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT25_21580 | Not Available | Negative | 5391878 - 5392342 | 17192.6 |
| naat family transporter | EHT25_21585 | Not Available | Negative | 5392519 - 5393082 | 20091.7 |
| aminotransferase class v-fold plp-dependent enzyme | EHT25_21590 | Not Available | Negative | 5393145 - 5394167 | 37940.4 |
| type ii 3-dehydroquinate dehydratase | EHT25_21595 | Not Available | Negative | 5394178 - 5394612 | 15963.2 |
| site-specific tyrosine recombinase xerd | EHT25_21600 | Not Available | Positive | 5394708 - 5395634 | 34712.9 |
| hypothetical protein | EHT25_21605 | Not Available | Negative | 5395690 - 5396229 | 20223.6 |
| class i sam-dependent methyltransferase | EHT25_21610 | Not Available | Negative | 5396339 - 5396935 | 22625.0 |
| hypothetical protein | EHT25_21615 | Not Available | Negative | 5396971 - 5397189 | 8115.87 |
| phosphohistidine phosphatase | EHT25_21620 | Not Available | Negative | 5397186 - 5397689 | 18386.0 |
| peptide chain release factor 3 | EHT25_21625 | Not Available | Positive | 5397861 - 5399459 | 60564.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
