Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | EHT25_21480 | Not Available | Negative | 5373208 - 5373504 | 11302.9 |
| hypothetical protein | EHT25_21485 | Not Available | Negative | 5373592 - 5373780 | 7205.66 |
| ompa family protein | EHT25_21490 | Not Available | Positive | 5374268 - 5374999 | 25918.9 |
| pa2169 family four-helix-bundle protein | EHT25_21495 | Not Available | Positive | 5375029 - 5375484 | 16927.9 |
| glycogen debranching enzyme glgx | EHT25_21500 | Not Available | Positive | 5375669 - 5377771 | 79460.9 |
| duf3891 family protein | EHT25_21505 | Not Available | Negative | 5377829 - 5378563 | 28345.6 |
| pyridoxamine 5'-phosphate oxidase | EHT25_21510 | Not Available | Negative | 5378639 - 5379142 | 19018.4 |
| four-helix bundle copper-binding protein | EHT25_21515 | Not Available | Negative | 5379487 - 5379891 | 15310.5 |
| hypothetical protein | EHT25_21520 | Not Available | Negative | 5379947 - 5380147 | 7259.65 |
| pas domain s-box protein | EHT25_21525 | Not Available | Negative | 5380423 - 5381886 | 55319.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
