Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss c-terminal target domain-containing protein | EHT25_21430 | Not Available | Positive | 5356643 - 5363194 | 233903.0 |
| hypothetical protein | EHT25_21435 | Not Available | Negative | 5363183 - 5363395 | 7295.1 |
| alpha/beta hydrolase | EHT25_21440 | Not Available | Positive | 5363625 - 5364557 | 35277.7 |
| glycosidase | EHT25_21445 | Not Available | Positive | 5364559 - 5365587 | 38414.0 |
| hypothetical protein | EHT25_21450 | Not Available | Positive | 5365754 - 5366005 | 9066.38 |
| duf3784 domain-containing protein | EHT25_21455 | Not Available | Positive | 5366271 - 5366582 | 11572.6 |
| mfs transporter | EHT25_21460 | Not Available | Negative | 5366590 - 5367855 | 45164.2 |
| tetr/acrr family transcriptional regulator | EHT25_21465 | Not Available | Negative | 5367970 - 5368563 | 23337.6 |
| s9 family peptidase | EHT25_21470 | Not Available | Positive | 5368702 - 5371686 | 112551.0 |
| wd40 repeat domain-containing protein | EHT25_21475 | Not Available | Positive | 5371870 - 5373141 | 44287.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
