Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf937 domain-containing protein | EHT25_21080 | Not Available | Negative | 5278496 - 5279782 | 45515.1 |
| phenylalanine--trna ligase subunit alpha | EHT25_21085 | Not Available | Negative | 5280050 - 5281102 | 40178.1 |
| lyttr family transcriptional regulator | EHT25_21090 | Not Available | Positive | 5281319 - 5281750 | 16828.4 |
| lyttr family transcriptional regulator | EHT25_21095 | Not Available | Positive | 5282007 - 5282420 | 16174.8 |
| port family protein | EHT25_21100 | Not Available | Negative | 5282544 - 5283236 | 25092.4 |
| port family protein | EHT25_21105 | Not Available | Negative | 5283428 - 5284120 | 24932.1 |
| dna repair protein rada | EHT25_21110 | Not Available | Positive | 5284317 - 5285690 | 49859.1 |
| sugar phosphate isomerase/epimerase | EHT25_21115 | Not Available | Positive | 5285871 - 5286719 | 31529.1 |
| hypothetical protein | EHT25_21120 | Not Available | Negative | 5286782 - 5287168 | 13888.6 |
| peptidoglycan editing factor pgef | EHT25_21125 | Not Available | Positive | 5287491 - 5288255 | 27737.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
