Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| t9ss c-terminal target domain-containing protein | EHT25_20930 | Not Available | Negative | 5237265 - 5237816 | 20406.4 |
| hypothetical protein | EHT25_20935 | Not Available | Negative | 5237861 - 5239516 | 57535.5 |
| t9ss c-terminal target domain-containing protein | EHT25_20940 | Not Available | Negative | 5241115 - 5242770 | 60990.8 |
| hypothetical protein | EHT25_20945 | Not Available | Positive | 5242695 - 5244617 | 69103.4 |
| dna/rna non-specific endonuclease | EHT25_20950 | Not Available | Negative | 5244674 - 5245543 | 31856.4 |
| hypothetical protein | EHT25_20955 | Not Available | Negative | 5245909 - 5246175 | 9831.07 |
| xre family transcriptional regulator | EHT25_20960 | Not Available | Positive | 5246566 - 5246910 | 13313.9 |
| hypothetical protein | EHT25_20965 | Not Available | Positive | 5247440 - 5248498 | 39515.1 |
| duf4249 family protein | EHT25_20970 | Not Available | Positive | 5248552 - 5249559 | 36752.9 |
| tonb-dependent receptor | EHT25_20975 | Not Available | Positive | 5249556 - 5251925 | 89882.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
