Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| alpha-galactosidase | EHT25_20730 | Not Available | Negative | 5195440 - 5197446 | 73905.9 |
| duf1080 domain-containing protein | EHT25_20735 | Not Available | Negative | 5197588 - 5198970 | 51855.7 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_20740 | Not Available | Negative | 5199086 - 5200957 | 69009.6 |
| susc/raga family tonb-linked outer membrane protein | EHT25_20745 | Not Available | Negative | 5200985 - 5204326 | 122372.0 |
| duf4974 domain-containing protein | EHT25_20750 | Not Available | Negative | 5204440 - 5205528 | 41355.6 |
| rna polymerase sigma-70 factor | EHT25_20755 | Not Available | Negative | 5205580 - 5206242 | 25831.6 |
| alpha-n-arabinofuranosidase | EHT25_20760 | Not Available | Negative | 5206809 - 5207879 | 39694.6 |
| response regulator | EHT25_20765 | Not Available | Positive | 5208823 - 5209227 | 15185.2 |
| threonine/serine dehydratase | EHT25_20770 | Not Available | Negative | 5209267 - 5210229 | 34557.6 |
| alpha/beta fold hydrolase | EHT25_20775 | Not Available | Negative | 5210290 - 5211057 | 28753.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
