Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 30s ribosomal protein s16 | EHT25_02020 | Not Available | Positive | 462803 - 463345 | 19498.1 |
| 16s rrna processing protein rimm | EHT25_02025 | Not Available | Positive | 463556 - 464146 | 22156.3 |
| trna (guanosine(37)-n1)-methyltransferase trmd | EHT25_02030 | Not Available | Positive | 464136 - 464810 | 25308.3 |
| penicillin-binding protein | EHT25_02035 | Not Available | Negative | 464907 - 467096 | 81963.6 |
| gnat family n-acetyltransferase | EHT25_02040 | Not Available | Negative | 467162 - 467611 | 17341.7 |
| rlua family pseudouridine synthase | EHT25_02045 | Not Available | Negative | 467778 - 468836 | 39975.4 |
| hypothetical protein | EHT25_02050 | Not Available | Positive | 469080 - 469412 | 12169.4 |
| 1-aminocyclopropane-1-carboxylate deaminase/d-cysteine desulfhydrase | EHT25_02055 | Not Available | Positive | 469416 - 470303 | 33065.5 |
| formyl transferase | EHT25_02060 | Not Available | Positive | 470364 - 471128 | 28731.2 |
| duf3473 domain-containing protein | EHT25_02065 | Not Available | Positive | 471132 - 471992 | 33600.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
