Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | EHT25_20370 | Not Available | Positive | 5083756 - 5086749 | 109026.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_20375 | Not Available | Positive | 5086818 - 5088191 | 50030.2 |
| tonb-dependent receptor | EHT25_20380 | Not Available | Positive | 5088440 - 5091484 | 111270.0 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_20385 | Not Available | Positive | 5091481 - 5092860 | 50938.1 |
| hypothetical protein | EHT25_20390 | Not Available | Positive | 5092917 - 5093747 | 30169.0 |
| hypothetical protein | EHT25_20395 | Not Available | Positive | 5093821 - 5094309 | 18356.7 |
| t9ss c-terminal target domain-containing protein | EHT25_20400 | Not Available | Positive | 5094442 - 5096799 | 85132.4 |
| hypothetical protein | EHT25_20405 | Not Available | Negative | 5096851 - 5097426 | 22469.8 |
| hypothetical protein | EHT25_20410 | Not Available | Negative | 5097879 - 5098655 | 30378.9 |
| hypothetical protein | EHT25_20415 | Not Available | Negative | 5098702 - 5099205 | 19347.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
