Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | EHT25_20270 | Not Available | Negative | 5059997 - 5060734 | 27789.9 |
| rok family protein | EHT25_20275 | Not Available | Positive | 5060890 - 5061810 | 32824.4 |
| sel1 repeat family protein | EHT25_20280 | Not Available | Positive | 5062169 - 5064559 | 88464.0 |
| tonb-dependent receptor | EHT25_20285 | Not Available | Negative | 5064720 - 5067290 | 93584.3 |
| hypothetical protein | EHT25_20290 | Not Available | Negative | 5067639 - 5068265 | 24112.8 |
| sigma-70 family rna polymerase sigma factor | EHT25_20295 | Not Available | Negative | 5068277 - 5068765 | 18664.7 |
| duf4385 domain-containing protein | EHT25_20300 | Not Available | Positive | 5068891 - 5069391 | 19506.2 |
| nadp-dependent malic enzyme | EHT25_20305 | Not Available | Negative | 5069478 - 5071745 | 82939.4 |
| hypothetical protein | EHT25_20310 | Not Available | Negative | 5071968 - 5072213 | 9337.58 |
| mfs transporter | EHT25_20315 | Not Available | Negative | 5072428 - 5073648 | 44028.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
