Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acetate--coa ligase | EHT25_20220 | Not Available | Positive | 5047562 - 5049475 | 71099.8 |
| hypothetical protein | EHT25_20225 | Not Available | Negative | 5049556 - 5049951 | 15509.8 |
| hypothetical protein | EHT25_20230 | Not Available | Negative | 5049909 - 5050157 | 9169.48 |
| t9ss c-terminal target domain-containing protein | EHT25_20235 | Not Available | Positive | 5050484 - 5051221 | 27342.1 |
| methylated-dna--[protein]-cysteine s-methyltransferase | EHT25_20240 | Not Available | Positive | 5051303 - 5052154 | 31304.3 |
| prolyl 4-hydroxylase subunit alpha | EHT25_20245 | Not Available | Positive | 5052268 - 5052963 | 26532.4 |
| metal-binding protein | EHT25_20250 | Not Available | Positive | 5052960 - 5053259 | 11255.6 |
| hypothetical protein | EHT25_20255 | Not Available | Negative | 5053308 - 5057810 | 164916.0 |
| efflux rnd transporter periplasmic adaptor subunit | EHT25_20260 | Not Available | Negative | 5057933 - 5058985 | 38048.2 |
| tetr/acrr family transcriptional regulator | EHT25_20265 | Not Available | Negative | 5059227 - 5059820 | 23392.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
