Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | EHT25_20120 | Not Available | Positive | 5016156 - 5017385 | 45359.0 |
| peptidase m1 | EHT25_20125 | Not Available | Positive | 5017454 - 5020012 | 98284.1 |
| duf1080 domain-containing protein | EHT25_20130 | Not Available | Positive | 5020329 - 5021114 | 28701.7 |
| ftsx-like permease family protein | EHT25_20135 | Not Available | Negative | 5021212 - 5023911 | 101517.0 |
| padr family transcriptional regulator | EHT25_20140 | Not Available | Negative | 5023908 - 5024246 | 12186.0 |
| dna polymerase i | EHT25_20145 | Not Available | Positive | 5024569 - 5027502 | 109824.0 |
| universal stress protein | EHT25_20150 | Not Available | Positive | 5027637 - 5028503 | 32215.4 |
| magnesium/cobalt transporter cora | EHT25_20155 | Not Available | Positive | 5028599 - 5029678 | 41755.0 |
| bifunctional udp-n-acetylmuramoyl-tripeptide:d-alanyl-d-alanine ligase/alanine racemase | EHT25_20160 | Not Available | Positive | 5029817 - 5032315 | 92740.5 |
| hypothetical protein | EHT25_20165 | Not Available | Negative | 5032528 - 5033238 | 26472.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
