Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycine--trna ligase | EHT25_20070 | Not Available | Negative | 5005766 - 5007265 | 57389.5 |
| hybrid sensor histidine kinase/response regulator | EHT25_20075 | Not Available | Positive | 5007810 - 5009432 | 60243.0 |
| response regulator | EHT25_20080 | Not Available | Positive | 5009547 - 5009936 | 14512.9 |
| hypothetical protein | EHT25_20085 | Not Available | Negative | 5010051 - 5010350 | 11543.2 |
| j domain-containing protein | EHT25_20090 | Not Available | Negative | 5010362 - 5011249 | 33079.6 |
| helix-hairpin-helix domain-containing protein | EHT25_20095 | Not Available | Positive | 5011509 - 5012504 | 37845.9 |
| tigr00730 family rossman fold protein | EHT25_20100 | Not Available | Negative | 5012552 - 5013349 | 30043.1 |
| ribose 5-phosphate isomerase b | EHT25_20105 | Not Available | Positive | 5013687 - 5014121 | 15697.6 |
| hypothetical protein | EHT25_20110 | Not Available | Negative | 5014111 - 5015490 | 52733.0 |
| 30s ribosome-binding factor rbfa | EHT25_20115 | Not Available | Positive | 5015775 - 5016152 | 14563.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
