Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding response regulator | EHT25_20020 | Not Available | Positive | 4992662 - 4993435 | 30100.4 |
| sigma-70 family rna polymerase sigma factor | EHT25_20025 | Not Available | Positive | 4993625 - 4994122 | 19600.5 |
| hypothetical protein | EHT25_20030 | Not Available | Positive | 4994134 - 4994805 | 25992.3 |
| dehydrogenase | EHT25_20035 | Not Available | Positive | 4994867 - 4996678 | 63659.8 |
| abc transporter permease | EHT25_20040 | Not Available | Negative | 4996741 - 4998072 | 49295.3 |
| atp-binding cassette domain-containing protein | EHT25_20045 | Not Available | Negative | 4998081 - 4998992 | 34521.9 |
| rdd family protein | EHT25_20050 | Not Available | Negative | 4999236 - 4999655 | 15119.0 |
| dicarboxylate/amino acid:cation symporter | EHT25_20055 | Not Available | Positive | 4999861 - 5001267 | 50426.5 |
| t9ss c-terminal target domain-containing protein | EHT25_20060 | Not Available | Positive | 5001401 - 5005234 | 135494.0 |
| hypothetical protein | EHT25_20065 | Not Available | Negative | 5005259 - 5005708 | 17926.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
