Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| efflux rnd transporter periplasmic adaptor subunit | EHT25_19870 | Not Available | Positive | 4948135 - 4949217 | 41022.4 |
| efflux rnd transporter permease subunit | EHT25_19875 | Not Available | Positive | 4949333 - 4952539 | 117778.0 |
| efflux transporter outer membrane subunit | EHT25_19880 | Not Available | Positive | 4952529 - 4953965 | 53468.0 |
| heparinase | EHT25_19885 | Not Available | Negative | 4954098 - 4955975 | 69770.9 |
| gfo/idh/moca family oxidoreductase | EHT25_19890 | Not Available | Positive | 4956174 - 4957544 | 51456.0 |
| hypothetical protein | EHT25_19895 | Not Available | Positive | 4957545 - 4959260 | 63543.0 |
| duf1080 domain-containing protein | EHT25_19900 | Not Available | Negative | 4959333 - 4959971 | 24093.9 |
| hypothetical protein | EHT25_19905 | Not Available | Positive | 4960741 - 4962912 | 74940.8 |
| hypothetical protein | EHT25_19910 | Not Available | Positive | 4962967 - 4963797 | 27654.4 |
| hypothetical protein | EHT25_19915 | Not Available | Negative | 4963909 - 4964832 | 33545.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
