Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf4974 domain-containing protein | EHT25_19770 | Not Available | Negative | 4928903 - 4929913 | 38609.7 |
| rna polymerase sigma-70 factor | EHT25_19775 | Not Available | Negative | 4929982 - 4930662 | 26448.5 |
| arabinose isomerase | EHT25_19780 | Not Available | Positive | 4930863 - 4932350 | 54236.1 |
| hypothetical protein | EHT25_19785 | Not Available | Positive | 4932490 - 4932747 | 10191.5 |
| response regulator | EHT25_19790 | Not Available | Positive | 4932824 - 4933264 | 16974.4 |
| sgnh/gdsl hydrolase family protein | EHT25_19795 | Not Available | Positive | 4933495 - 4934172 | 25233.9 |
| bcr/cfla family efflux mfs transporter | EHT25_19800 | Not Available | Positive | 4934527 - 4935762 | 44179.2 |
| glyoxalase/bleomycin resistance/extradiol dioxygenase family protein | EHT25_19805 | Not Available | Negative | 4935835 - 4936266 | 15854.8 |
| t9ss c-terminal target domain-containing protein | EHT25_19810 | Not Available | Positive | 4937083 - 4937478 | 14328.1 |
| hypothetical protein | EHT25_19815 | Not Available | Negative | 4937677 - 4938165 | 18122.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
