Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yicc family protein | EHT25_19470 | Not Available | Positive | 4852936 - 4853826 | 33822.6 |
| l-lysine dehydrogenase | EHT25_19475 | Not Available | Negative | 4853921 - 4854979 | 38709.0 |
| dna-3-methyladenine glycosylase | EHT25_19480 | Not Available | Positive | 4855419 - 4856021 | 22002.7 |
| coce/nond family hydrolase | EHT25_19485 | Not Available | Negative | 4856058 - 4857974 | 72655.8 |
| tonb-dependent receptor | EHT25_19490 | Not Available | Positive | 4858096 - 4860468 | 88060.1 |
| pepsy domain-containing protein | EHT25_19495 | Not Available | Positive | 4860481 - 4861641 | 43903.4 |
| hypothetical protein | EHT25_19500 | Not Available | Negative | 4861782 - 4863401 | 58439.6 |
| hypothetical protein | EHT25_19505 | Not Available | Negative | 4863493 - 4864089 | 21821.5 |
| aldehyde dehydrogenase family protein | EHT25_19510 | Not Available | Positive | 4864411 - 4865943 | 55995.8 |
| aldose 1-epimerase | EHT25_19515 | Not Available | Negative | 4866008 - 4866973 | 35605.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
