Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsae | EHT25_19370 | Not Available | Positive | 4829518 - 4829928 | 15055.9 |
| alanine dehydrogenase | EHT25_19375 | Not Available | Positive | 4830045 - 4831256 | 44035.7 |
| hypothetical protein | EHT25_19380 | Not Available | Positive | 4831360 - 4831767 | 15392.2 |
| hypothetical protein | EHT25_19385 | Not Available | Negative | 4831873 - 4833384 | 56965.9 |
| homoserine kinase | EHT25_19390 | Not Available | Negative | 4833569 - 4834498 | 32582.7 |
| bifunctional aspartate kinase/homoserine dehydrogenase i | EHT25_19395 | Not Available | Negative | 4834567 - 4837029 | 89597.0 |
| vwa domain-containing protein | EHT25_19400 | Not Available | Positive | 4837327 - 4838430 | 42015.6 |
| hypothetical protein | EHT25_19405 | Not Available | Positive | 4838435 - 4838665 | 8477.33 |
| type ii toxin-antitoxin system death-on-curing family toxin | EHT25_19410 | Not Available | Positive | 4838662 - 4839039 | 14029.7 |
| magnesium chelatase | EHT25_19415 | Not Available | Positive | 4839112 - 4840638 | 57098.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
