Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nif3-like dinuclear metal center hexameric protein | EHT25_19220 | Not Available | Positive | 4791021 - 4792142 | 41037.8 |
| hypothetical protein | EHT25_19225 | Not Available | Positive | 4792161 - 4792910 | 28679.2 |
| tetratricopeptide repeat protein | EHT25_19230 | Not Available | Positive | 4792998 - 4794482 | 56321.6 |
| response regulator | EHT25_19235 | Not Available | Negative | 4794460 - 4795191 | 28142.9 |
| sensor histidine kinase | EHT25_19240 | Not Available | Negative | 4795328 - 4796395 | 41088.3 |
| histidine phosphatase family protein | EHT25_19245 | Not Available | Negative | 4796564 - 4797202 | 24350.9 |
| hotdog fold thioesterase | EHT25_19250 | Not Available | Positive | 4797356 - 4797775 | 15435.8 |
| response regulator | EHT25_19255 | Not Available | Positive | 4797874 - 4798341 | 17957.1 |
| histidine kinase | EHT25_19260 | Not Available | Negative | 4798352 - 4799395 | 40777.6 |
| dna-binding response regulator | EHT25_19265 | Not Available | Negative | 4799397 - 4800164 | 29470.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
