Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ycei family protein | EHT25_18955 | Not Available | Negative | 4723111 - 4723764 | 23313.1 |
| tonb-dependent receptor | EHT25_18960 | Not Available | Negative | 4723903 - 4726596 | 97241.8 |
| hypothetical protein | EHT25_18965 | Not Available | Negative | 4726767 - 4727153 | 13861.5 |
| sensor histidine kinase | EHT25_18970 | Not Available | Positive | 4727630 - 4728700 | 40812.1 |
| dna-binding response regulator | EHT25_18975 | Not Available | Positive | 4728697 - 4729452 | 28715.9 |
| tagaturonate reductase | EHT25_18980 | Not Available | Negative | 4729424 - 4730968 | 57920.5 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | EHT25_18985 | Not Available | Negative | 4731147 - 4731821 | 24340.4 |
| sugar kinase | EHT25_18990 | Not Available | Negative | 4731891 - 4732886 | 36290.9 |
| mfs transporter | EHT25_18995 | Not Available | Negative | 4733031 - 4734371 | 49797.1 |
| branched-chain amino acid aminotransferase | EHT25_19000 | Not Available | Positive | 4734551 - 4736272 | 64456.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
