Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pirin family protein | EHT25_18705 | Not Available | Negative | 4661598 - 4662494 | 33372.0 |
| hypothetical protein | EHT25_18710 | Not Available | Negative | 4662575 - 4663072 | 18813.9 |
| l-fucose:h+ symporter permease | EHT25_18715 | Not Available | Negative | 4663214 - 4664452 | 44600.8 |
| serine protease | EHT25_18720 | Not Available | Negative | 4664606 - 4665598 | 37039.4 |
| sigma-70 family rna polymerase sigma factor | EHT25_18725 | Not Available | Negative | 4665750 - 4666325 | 22335.4 |
| hypothetical protein | EHT25_18730 | Not Available | Positive | 4666467 - 4666652 | 6349.52 |
| hemin abc transporter substrate-binding protein | EHT25_18735 | Not Available | Positive | 4666886 - 4667749 | 30592.6 |
| iron abc transporter permease | EHT25_18740 | Not Available | Positive | 4667767 - 4668873 | 38277.5 |
| heme abc transporter atp-binding protein | EHT25_18745 | Not Available | Positive | 4668901 - 4669737 | 30942.7 |
| hemin-degrading factor | EHT25_18750 | Not Available | Positive | 4669747 - 4670781 | 38254.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
