Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | EHT25_18655 | Not Available | Positive | 4649939 - 4650955 | 38049.7 |
| aminotransferase class v-fold plp-dependent enzyme | EHT25_18660 | Not Available | Positive | 4651007 - 4652287 | 46728.6 |
| mbl fold metallo-hydrolase | EHT25_18665 | Not Available | Negative | 4652298 - 4653383 | 40009.0 |
| hypothetical protein | EHT25_18670 | Not Available | Negative | 4653514 - 4655772 | 81438.2 |
| alpha-hydroxy-acid oxidizing protein | EHT25_18675 | Not Available | Positive | 4656198 - 4657247 | 37881.7 |
| lactonase family protein | EHT25_18680 | Not Available | Positive | 4657325 - 4658428 | 39749.4 |
| peptidase | EHT25_18685 | Not Available | Positive | 4658446 - 4659381 | 35022.7 |
| 4,5-dopa dioxygenase extradiol | EHT25_18690 | Not Available | Negative | 4659454 - 4660287 | 31025.4 |
| nadp oxidoreductase | EHT25_18695 | Not Available | Negative | 4660347 - 4660853 | 18600.3 |
| crp/fnr family transcriptional regulator | EHT25_18700 | Not Available | Negative | 4660965 - 4661546 | 22777.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
