Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ftsx-like permease family protein | EHT25_18555 | Not Available | Positive | 4620205 - 4622622 | 89679.5 |
| class a beta-lactamase-related serine hydrolase | EHT25_18560 | Not Available | Positive | 4622791 - 4624191 | 51757.4 |
| n-methyl-l-tryptophan oxidase | EHT25_18565 | Not Available | Negative | 4624441 - 4625640 | 44257.7 |
| type 1 glutamine amidotransferase | EHT25_18570 | Not Available | Negative | 4625725 - 4626294 | 20829.8 |
| ftsx-like permease family protein | EHT25_18575 | Not Available | Negative | 4626394 - 4628787 | 89203.9 |
| serine hydrolase | EHT25_18580 | Not Available | Negative | 4629246 - 4630739 | 56563.8 |
| serine hydrolase | EHT25_18585 | Not Available | Negative | 4630845 - 4631921 | 38645.4 |
| dna polymerase iii subunit alpha | EHT25_18590 | Not Available | Negative | 4632099 - 4635095 | 115839.0 |
| hypothetical protein | EHT25_18595 | Not Available | Negative | 4635111 - 4635557 | 17195.5 |
| dna polymerase iv | EHT25_18600 | Not Available | Negative | 4635575 - 4636762 | 44125.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
