Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Cytophagia
Order
Cytophagales
Family
Spirosomataceae
Genus
Larkinella
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Cytophagia |
| Order | Cytophagales |
| Family | Spirosomataceae |
| Genus | Larkinella |
| Species | Larkinella rosea |
| Strain | KCTC52004 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
2006507 bp
Thymine Count
2010626 bp
Guanine Count
2097385 bp
Cytosine Count
2061540 bp
Genome Length
8177225 bp
Protein-coding Genes
6388 genes
Non-Coding Genes
52 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycoside hydrolase family 28 protein | EHT25_18455 | Not Available | Positive | 4589126 - 4590706 | 58028.4 |
| glycoside hydrolase family 95 protein | EHT25_18460 | Not Available | Negative | 4590813 - 4593650 | 105516.0 |
| l-rhamnose mutarotase | EHT25_18465 | Not Available | Negative | 4593796 - 4596315 | 94608.3 |
| glycoside hydrolase family 2 | EHT25_18470 | Not Available | Negative | 4596320 - 4599103 | 104988.0 |
| arabinosidase | EHT25_18475 | Not Available | Negative | 4599121 - 4600029 | 35002.7 |
| ragb/susd family nutrient uptake outer membrane protein | EHT25_18480 | Not Available | Negative | 4600241 - 4601656 | 52591.4 |
| tonb-dependent receptor | EHT25_18485 | Not Available | Negative | 4601679 - 4604852 | 116164.0 |
| duf5060 domain-containing protein | EHT25_18490 | Not Available | Positive | 4605065 - 4606636 | 60115.1 |
| deor/glpr transcriptional regulator | EHT25_18495 | Not Available | Positive | 4606843 - 4607607 | 27773.8 |
| hypothetical protein | EHT25_18500 | Not Available | Negative | 4607614 - 4610364 | 102816.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
